dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004754_8|CGC1
Gene ID: MGYG000004754_03605
Location and strand information: 23041 - 24231 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 9.137
Protein molecular weight: 45737.34
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004754_8|CGC1
Gene ID: MGYG000004754_03606
Location and strand information: 24250 - 25347 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004754_8|CGC1
Gene ID: MGYG000004754_03607
Location and strand information: 25427 - 27748 (+)
Family: GH20
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.3344
Protein molecular weight: 89449.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004754_8|CGC1
Gene ID: MGYG000004754_03608
Location and strand information: 27879 - 28688 (-)
Family: 3.A.1.24.1
Protein type: TC
Protein description: D-methionine-binding lipoprotein MetQ

Gene clsuter ID: MGYG000004754_8|CGC1
Gene ID: MGYG000004754_03609
Location and strand information: 28699 - 29355 (-)
Family: 3.A.1.24.1
Protein type: TC
Protein description: D-methionine transport system permease protein MetI

Gene clsuter ID: MGYG000004754_8|CGC1
Gene ID: MGYG000004754_03610
Location and strand information: 29348 - 30376 (-)
Family: 3.A.1.24.1
Protein type: TC
Protein description: Methionine import ATP-binding protein MetN

Gene clsuter ID: MGYG000004754_8|CGC1
Gene ID: MGYG000004754_03611
Location and strand information: 30874 - 31266 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004754_8|CGC1
Gene ID: MGYG000004754_03612
Location and strand information: 31412 - 32497 (+)
Family: 2.A.6.2.31
Protein type: TC
Protein description: Efflux pump periplasmic linker BepF

Gene clsuter ID: MGYG000004754_8|CGC1
Gene ID: MGYG000004754_03613
Location and strand information: 32518 - 35709 (+)
Family: 2.A.6.2.16
Protein type: TC
Protein description: Efflux pump membrane transporter BepE

Gene clsuter ID: MGYG000004754_8|CGC1
Gene ID: MGYG000004754_03614
Location and strand information: 35765 - 37138 (+)
Family: 2.A.6.2.46
Protein type: TC
Protein description: Outer membrane protein OprM

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is glycosaminoglycan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004754_03605	Unsaturated chondroitin disaccharide hydrolase	CAZyme	23041	24231	+	GH88
MGYG000004754_03606	hypothetical protein	null	24250	25347	+	DUF4861
MGYG000004754_03607	hypothetical protein	CAZyme	25427	27748	+	GH20
MGYG000004754_03608	D-methionine-binding lipoprotein MetQ	TC	27879	28688	-	3.A.1.24.1
MGYG000004754_03609	D-methionine transport system permease protein MetI	TC	28699	29355	-	3.A.1.24.1
MGYG000004754_03610	Methionine import ATP-binding protein MetN	TC	29348	30376	-	3.A.1.24.1
MGYG000004754_03611	hypothetical protein	null	30874	31266	+	No domain
MGYG000004754_03612	Efflux pump periplasmic linker BepF	TC	31412	32497	+	2.A.6.2.31
MGYG000004754_03613	Efflux pump membrane transporter BepE	TC	32518	35709	+	2.A.6.2.16
MGYG000004754_03614	Outer membrane protein OprM	TC	35765	37138	+	2.A.6.2.46
Protein ID	Protein Name	Type	Start	End	Strand	Signature